MOMD:
Mouse Oral Microbiome Database
Home
Taxonomy
Genomics
Tools
16S rRNA Gene Idnetification
BLAST Search Genomes
Download
Publication
MOMD Genome Explorer
Selected genome:
Gemella sp.
19428wG2_WT2a
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
Genome Viewer
PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
Quick search
:
Match all words
Match any words
Match exact phrase
Partially
In whole field
(leave empty to show all)
PROKKA Genome Annotation:
contigs: 412
bases: 1,521,208 bps
CDS: 1,390
rRNA: 10
Repeat region:
tmRNA: 1
tRNA: 55
misc RNA:
Total features: 1,456
Total number of protein coding genes annotated/found:
1,390
Display
20
50
100
All items per page
Items 1 - 20
🡆
click arrow to navigate by page or
of 70 pages
Molecule ^
PID/GenBank ID *
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5020|JADGKU010000009.1
SEQF5020_01456
Genome Viewer
NA
AA
639/213
42500-41862
hypothetical protein
SEQF5020|JADGKU010000009.1
SEQF5020_01455
Genome Viewer
NA
AA
1119/373
40630-39512
tRNA(Met) cytidine acetate ligase
SEQF5020|JADGKU010000009.1
SEQF5020_01454
Genome Viewer
NA
AA
669/223
39501-38833
hypothetical protein
SEQF5020|JADGKU010000009.1
SEQF5020_01453
Genome Viewer
NA
AA
3414/1138
35337-38750
hypothetical protein
SEQF5020|JADGKU010000009.1
SEQF5020_01452
Genome Viewer
NA
AA
705/235
34434-35138
hypothetical protein
SEQF5020|JADGKU010000009.1
SEQF5020_01451
Genome Viewer
NA
AA
333/111
34118-34450
hypothetical protein
SEQF5020|JADGKU010000009.1
SEQF5020_01450
Genome Viewer
NA
AA
360/120
33758-33399
hypothetical protein
SEQF5020|JADGKU010000009.1
SEQF5020_01449
Genome Viewer
NA
AA
252/84
33398-33147
hypothetical protein
SEQF5020|JADGKU010000009.1
SEQF5020_01448
Genome Viewer
NA
AA
213/71
32495-32707
hypothetical protein
SEQF5020|JADGKU010000009.1
SEQF5020_01447
Genome Viewer
NA
AA
195/65
32284-32478
hypothetical protein
SEQF5020|JADGKU010000009.1
SEQF5020_01446
Genome Viewer
NA
AA
807/269
32129-31323
Diadenylate cyclase
SEQF5020|JADGKU010000009.1
SEQF5020_01445
Genome Viewer
NA
AA
957/319
31323-30367
CdaA regulatory protein CdaR
SEQF5020|JADGKU010000009.1
SEQF5020_01444
Genome Viewer
NA
AA
249/83
30302-30054
hypothetical protein
SEQF5020|JADGKU010000009.1
SEQF5020_01443
Genome Viewer
NA
AA
2040/680
27839-29878
ATP-dependent zinc metalloprotease FtsH
SEQF5020|JADGKU010000009.1
SEQF5020_01442
Genome Viewer
NA
AA
552/184
27257-27808
Hypoxanthine-guanine phosphoribosyltransferase
SEQF5020|JADGKU010000009.1
SEQF5020_01441
Genome Viewer
NA
AA
1317/439
25936-27252
tRNA(Ile)-lysidine synthase
SEQF5020|JADGKU010000009.1
SEQF5020_01440
Genome Viewer
NA
AA
633/211
25314-25946
hypothetical protein
SEQF5020|JADGKU010000009.1
SEQF5020_01439
Genome Viewer
NA
AA
447/149
24457-24011
hypothetical protein
SEQF5020|JADGKU010000009.1
SEQF5020_01438
Genome Viewer
NA
AA
1815/605
24018-22204
putative ABC transporter ATP-binding protein
SEQF5020|JADGKU010000009.1
SEQF5020_01437
Genome Viewer
NA
AA
1776/592
22214-20439
Fatty acid ABC transporter ATP-binding/permease protein
Items 1 - 20
🡆
click arrow to navigate by page or
of 70 pages
Genome Viewer
JBrowse Genome Viewer
* Click GI, UID, Gene Product to go to NCBI record
^ Click column names to toggle sorting
Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
Powered by
